PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thecc1EG023491t6
Common NameTCM_023491
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
Family bZIP
Protein Properties Length: 271aa    MW: 30380.1 Da    PI: 10.0261
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thecc1EG023491t6genomeCGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.82.8e-091761145
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1  1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                      ek  +  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Thecc1EG023491t6 17 EKNQRTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 61
                      56677889************************9777777666555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.3E-81264No hitNo description
SMARTSM003381.7E-71780IPR004827Basic-leucine zipper domain
PfamPF001701.7E-61761IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.1971963IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.5E-72164No hitNo description
PROSITE patternPS0003602439IPR004827Basic-leucine zipper domain
PfamPF141442.9E-12111142IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MADASPRTDT STDDTDEKNQ RTLRRLAQNR EAARKSRLRK KAYVQQLESS RLKLTQLEQE  60
LQRARQQGIF ISSSGDQSHS MSGNGALAFD VEYARWLEEH NRQINELRAA VNSHAGMWKT  120
PAERCFLWIG GFRSSELLKL LANQLEPLTE QQFMGIHNLQ QSSQQAEDAL SQGMEALQQS  180
LAETLTNGSP GPSGSSGNVA NYMGQMAMAM GKLGTLEGFV RQADNLRQQT LQQMHRILTT  240
RQSARALLAI NDYFSRLRAL SSLWLARPRE *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007028140.10.0BZIP domain class transcription factor isoform 6
SwissprotQ415581e-158HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A061EW690.0A0A061EW69_THECC; BZIP domain class transcription factor isoform 6
STRINGGLYMA15G37220.21e-164(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-113bZIP family protein
Publications ? help Back to Top
  1. Motamayor JC, et al.
    The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color.
    Genome Biol., 2013. 14(6): p. r53
    [PMID:23731509]